extractDepths: Extract values at a depth or series of depths

In tadhg-moore/gotmtools: Tools to work with GOTM input data and also process the output data

Description

Extracts a variable at a certain depth or series of depths from netCDF or from text output

Usage

extractDepths(mod.val, mod.dep, ncdf = NULL, var = NULL,
  depths = NULL, method = "linear", print = T)

Arguments

mod.val	dataframe of modelled values loaded using load.3d
mod.dep	dataframe of depths of corresponding modelled values loaded
ncdf	filepath; Name of the netCDF file to extract variable
var	character; Name of the variable to be extracted. Must match short names in the netcdf file. Use list_vars() to view variables
depths	vector of depth(s) for which to extract the value at
method	character determining method for extracting depths at interpolated temperatures. Either linear interpolation or cubic spline. Defaults to linear.
print	logical; Print a progress bar to the console. Defaults to TRUE

Value

data frame in the long format the same as load.obs(). With modelled values at the selected depths.

tadhg-moore/gotmtools documentation built on Oct. 9, 2019, 2:48 p.m.