extract_model_tmas: Extract model tmas

In taiawu/dsfworld_package: Visualizes and Analyzes Differential Scanning Fluorimetry Data

Extract model tmas

Description

Starting from a tibble containing dsfworld fit information, use extract_model_tmas to pull just resulting tmas into a tidy tibble. Probably belongs somewhere in the fitting function scripts, ultimately.

Usage

extract_model_tmas(
  by_var_fit,
  .var_col = ".var",
  .model_name_col = "model_name",
  .model_tma_col = "model_tma"
)

Arguments

by_var_fit	a tibble, as output by add_model_fits.
.var_col	a string, giving the name of the column in by_var_fit containing the unique-identifier for each dataset. Defaults to ".var"
.model_name_col	a string, giving the name of the column in by_var_fit containing the name of the fitted model used to find a given tma. Defaults to "model_name"
.model_tma_col	a string, giving the name of the column in by_var_fit containing the tma resulting from the model fitting and tma extraction. Defaults to "model_tma".

Value

a tibble of apparent melting temperatures, comprising four columns

• .var character, giving the unique dataset identifier for each DSF trace.

• model_name character, giving the name of the model from which the given values and tmas were found, e.g. "model_1", "model_2"

• which_value character, giving the specific component for a given value, e.g. "sigmoid_1", "sigmoid_2"

• tma numeric, the value of the calculated tma in reference to normalized Temperatures.

taiawu/dsfworld_package documentation built on June 18, 2024, 5:39 a.m.