seqExtract: Sequence extraction

Description Usage Arguments Value

View source: R/seqExtract.R

Description

Sequence extraction from the given range from position.

Usage

1
seqExtract(positions, genome, seq_range = c(-5000, 5000))

Arguments

positions

genpomic coordinates

genome

genome sequence (from BSgenome data)

seq_range

sequence extraction target range from position

Value

a DNAStringSet format sequences


takahirosuzuki1980/test documentation built on April 2, 2021, 11 a.m.