Man pages for takenakayoichi/tacs
Time Course Analysis of Control strength toward nodes/gene expression on directed graph based on Information Criterion.
| animation | Display Animation of Control Strength of each time-point or... |
| calc_ic | Calculate information criterion of each node of the network... |
| calc_ic_with_edges | Calculate information criterion of each node of the network... |
| calc_ic_without_edge | Calculate information criterion of each node of the network... |
| consistency_check | Check the consistency on input parameters |
| cutoff_edge_weight | set edges weights to zero under n*standard deviations |
| dream4 | time-course gene expression profile with 10 genes from... |
| make_data_frame_to_store_ic | make a data_frame object to store ic |
| plot.tacs | Plot function for tacs class |
| print.tacs | print function for tacs class |
| select.nodes | Select nodes by name list |
| select.segments | Select segment by name |
| set_edge_weight | generate edgeweight from a row of dataframe |
| set_layout | returns layout of graph nodes |
| set_lower_exp | Convert data set for simple markov property, set data for... |
| set_row_name | Generate list of row names of data frame, which to store ic... |
| set_segname_col | Generate list of segment name to categorize |
| set_upper_exp | Convert data set for simple markov property set data for up... |
| summary.tacs | summary function for tacs class |
| tacs | Calculate Control Strength toward every nodes on directed... |
| tacs_test | test tacs package |
| vsCor | Calc coeffcient between Controll strength of nodes and... |
