Files in tamartsi/Aclust
Clustering functions and analysis pipeline for methylation outcome data based on clustering and GEEs
.Rbuildignore
.gitignore
Aclust.Rproj
DESCRIPTION
NAMESPACE
NEWS
R/Aclust-internal.R
R/Acluster.R
R/Dbp.merge.R
R/GEE.clusters.R
R/annot.clusters.R
R/annot.probe.vec.R
R/assign.to.clusters.R
R/calc.dist.clust.point.R
R/calc.dist.clusters.R
R/calc.dist.d.neighbor.R
R/create.annot.triche.R
R/expit.R
R/first.R
R/last.R
R/load.annotation.R
R/logit.R
R/order.betas.by.chrom.location.R
R/organize.island.repeated.R
R/plot.cor.clusts.R
R/print.clusters.gee.summary.R
R/print.site.analysis.R
R/summarize.top.clusters.R
R/update.clust.indicator.R
data/annot.7.rda
data/betas.7.rda
man/Aclust-package.Rd
man/Acluster.Rd
man/Dbp.merge.Rd
man/GEE.clusters.Rd
man/annot.Rd
man/annot.clusters.Rd
man/annot.probe.vec.Rd
man/assign.to.clusters.Rd
man/betas.7.Rd
man/calc.dist.clust.point.Rd
man/calc.dist.clusters.Rd
man/calc.dist.d.neighbor.Rd
man/create.annot.triche.Rd
man/expit.Rd
man/first.Rd
man/last.Rd
man/load.annotation.Rd
man/logit.Rd
man/order.betas.by.chrom.location.Rd
man/organize.island.repeated.Rd
man/plot.cor.clusts.Rd
man/print.clusters.gee.summary.Rd
man/print.site.analysis.Rd
man/summarize.top.clusters.Rd
man/update.clust.indicator.Rd
