API for tanaylab/reputils
Utility functions for working with transposable elements

Global functions
%fin%	Man page
.headerToSegInfo	Source code
.onLoad	Source code
.readBamF	Source code
.seqinfoToHeader	Source code
Reputils	Man page
Reputils-package	Man page
`%fin%`	Source code
addSeq	Man page Source code
checkFormat	Man page Source code
chunk	Man page Source code
chunkFiles	Man page Source code
curateGenes	Man page Source code
curateTEs	Man page
deduplicateBAM	Man page Source code
downsamp	Man page Source code
exportBAM	Source code
geom_split_violin	Source code
getTSS	Man page Source code
import10x	Source code
importBAM	Man page Source code
importDFAM	Man page Source code
importMSA	Source code
importRMSK	Man page Source code
importTEs	Man page Source code
importUCSC	Man page Source code
longToSparse	Man page Source code
mafft	Man page Source code
msaToLong	Man page Source code
mutateReads	Man page Source code
mutateSeqs	Man page
plotEmpty	Source code
plotMSA	Source code
sparseToLong	Source code
splitBAM	Man page
toMat	Source code
varmean	Man page
writeMM2	Man page Source code

tanaylab/reputils documentation built on Nov. 5, 2019, 9:58 a.m.

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