API for tanaylab/reputils
Utility functions for working with transposable elements

Global functions
%fin% Man page
.headerToSegInfo Source code
.onLoad Source code
.readBamF Source code
.seqinfoToHeader Source code
Reputils Man page
Reputils-package Man page
`%fin%` Source code
addSeq Man page Source code
checkFormat Man page Source code
chunk Man page Source code
chunkFiles Man page Source code
curateGenes Man page Source code
curateTEs Man page
deduplicateBAM Man page Source code
downsamp Man page Source code
exportBAM Source code
geom_split_violin Source code
getTSS Man page Source code
import10x Source code
importBAM Man page Source code
importDFAM Man page Source code
importMSA Source code
importRMSK Man page Source code
importTEs Man page Source code
importUCSC Man page Source code
longToSparse Man page Source code
mafft Man page Source code
msaToLong Man page Source code
mutateReads Man page Source code
mutateSeqs Man page
plotEmpty Source code
plotMSA Source code
sparseToLong Source code
splitBAM Man page
toMat Source code
varmean Man page
writeMM2 Man page Source code
tanaylab/reputils documentation built on Nov. 5, 2019, 9:58 a.m.