write.dna.sequence.reference: write the dna sequence of a predicted gene based on reference...
In tangshao2016/neoantigenR: neoantigen prediction from NGS sequencing data
Description
Usage
Arguments
Value
Description
write the dna sequence of a predicted gene based on reference genome object
Usage
1
write.dna.sequence.reference(Hsapiens, gene.df, file.name, gene.name)
Arguments
Hsapiens
the name of input file
gene.df
a data frame (gff) of predicted gene's coordinates
file.name
the output file name to be written
gene.name
the gene of interest for dna sequence extraction
Value
a dna sequence file will be written to output file
tangshao2016/neoantigenR documentation built on May 21, 2019, 3:04 a.m.
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Description Usage Arguments Value
Description
write the dna sequence of a predicted gene based on reference genome object
Usage
1 | write.dna.sequence.reference(Hsapiens, gene.df, file.name, gene.name)
|
Arguments
Hsapiens |
the name of input file |
gene.df |
a data frame (gff) of predicted gene's coordinates |
file.name |
the output file name to be written |
gene.name |
the gene of interest for dna sequence extraction |
Value
a dna sequence file will be written to output file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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