write.dna.sequence.reference: write the dna sequence of a predicted gene based on reference...

Description Usage Arguments Value

View source: R/antigenUtil.R

Description

write the dna sequence of a predicted gene based on reference genome object

Usage

1
write.dna.sequence.reference(Hsapiens, gene.df, file.name, gene.name)

Arguments

Hsapiens

the name of input file

gene.df

a data frame (gff) of predicted gene's coordinates

file.name

the output file name to be written

gene.name

the gene of interest for dna sequence extraction

Value

a dna sequence file will be written to output file


tangshao2016/neoantigenR documentation built on May 21, 2019, 3:04 a.m.