cluster.biotypes: Using Partitioning around medoids to clusters samples for a...

Description Usage Arguments Details Value Author(s) See Also Examples

View source: R/BiotypeR.r

Description

This function permit from a data frame (species as rows and samples as columns

Usage

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cluster.biotypes(x, ...)
## Default S3 method:
cluster.biotypes(x, k)
## Default S3 method:
cluster.biotypes(x, k)

Arguments

x

a data frame or a distance matrix

k

an interger number of clusters

...

not used

Details

This function use pam.

Value

a vector containing intenger number

Author(s)

Julien Tap

See Also

pam CH.index

Examples

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data(Titanium16S)
cluster.biotypes(Titanium16S, k=3)

tapj/biotyper documentation built on June 4, 2018, 7:33 p.m.