cluster.biotypes: Using Partitioning around medoids to clusters samples for a...
In tapj/biotyper: BiotypeR: an R package to biotype a community
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
This function permit from a data frame (species as rows and samples as columns
Usage
1
2
3
4
5
cluster.biotypes(x, ...)
## Default S3 method:
cluster.biotypes(x, k)
## Default S3 method:
cluster.biotypes(x, k)
Arguments
x
a data frame or a distance matrix
k
an interger number of clusters
...
not used
Details
This function use pam.
Value
a vector containing intenger number
Author(s)
Julien Tap
See Also
Examples
1
2
data(Titanium16S)
cluster.biotypes(Titanium16S, k=3)
tapj/biotyper documentation built on June 4, 2018, 7:33 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
This function permit from a data frame (species as rows and samples as columns
Usage
1 2 3 4 5 | cluster.biotypes(x, ...)
## Default S3 method:
cluster.biotypes(x, k)
## Default S3 method:
cluster.biotypes(x, k)
|
Arguments
x |
a data frame or a distance matrix |
k |
an interger number of clusters |
... |
not used |
Details
This function use pam.
Value
a vector containing intenger number
Author(s)
Julien Tap
See Also
Examples
1 2 | data(Titanium16S)
cluster.biotypes(Titanium16S, k=3)
|
tapj/biotyper documentation built on June 4, 2018, 7:33 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
As an Amazon Associate I earn from qualifying purchases.
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