cluster.biotypes: Using Partitioning around medoids to clusters samples for a...
In tapj/biotyper: BiotypeR: an R package to biotype a community
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
This function permit from a data frame (species as rows and samples as columns
Usage
1
2
3
4
5
cluster.biotypes(x, ...)
## Default S3 method:
cluster.biotypes(x, k)
## Default S3 method:
cluster.biotypes(x, k)
Arguments
x
a data frame or a distance matrix
k
an interger number of clusters
...
not used
Details
This function use pam.
Value
a vector containing intenger number
Author(s)
Julien Tap
See Also
Examples
1
2
data(Titanium16S)
cluster.biotypes(Titanium16S, k=3)
tapj/biotyper documentation built on Oct. 23, 2021, 5:44 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s) See Also Examples
Description
This function permit from a data frame (species as rows and samples as columns
Usage
1 2 3 4 5 | cluster.biotypes(x, ...)
## Default S3 method:
cluster.biotypes(x, k)
## Default S3 method:
cluster.biotypes(x, k)
|
Arguments
x |
a data frame or a distance matrix |
k |
an interger number of clusters |
... |
not used |
Details
This function use pam.
Value
a vector containing intenger number
Author(s)
Julien Tap
See Also
Examples
1 2 | data(Titanium16S)
cluster.biotypes(Titanium16S, k=3)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.