noise.removal: Remove noise species/functions
In tapj/biotyper: BiotypeR: an R package to biotype a community
Description
Usage
Arguments
Value
Author(s)
Examples
Description
This functions permit to remove low abundant species or function according a percentage or if they don't belong to the defined top ranking species.
Usage
1
noise.removal(dataframe, percent = NULL, top = NULL, bysample = TRUE)
Arguments
dataframe
a ecological data.frame
percent
a number between 0-100
top
a number between 1 to the maximum of species/functions. this functions use this criteria in priority.
bysample
Logical. if FALSE the function will take the average number across samples.
Value
a data.frame
Author(s)
Julien Tap
Examples
1
2
data(Titanium16)
noise.removal(Titanium16S, top=10)
tapj/biotyper documentation built on Oct. 23, 2021, 5:44 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
This functions permit to remove low abundant species or function according a percentage or if they don't belong to the defined top ranking species.
Usage
1 | noise.removal(dataframe, percent = NULL, top = NULL, bysample = TRUE)
|
Arguments
dataframe |
a ecological data.frame |
percent |
a number between 0-100 |
top |
a number between 1 to the maximum of species/functions. this functions use this criteria in priority. |
bysample |
Logical. if |
Value
a data.frame
Author(s)
Julien Tap
Examples
1 2 | data(Titanium16)
noise.removal(Titanium16S, top=10)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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