show_sedimentave: Plot sediment concentration averages by bay segment

In tbep-tech/tbeptools: Data and Indicators for the Tampa Bay Estuary Program

Plot sediment concentration averages by bay segment

Description

Plot sediment concentration averages by bay segment

Usage

show_sedimentave(
  sedimentdata,
  param,
  yrrng = c(1993, 2023),
  bay_segment = c("HB", "OTB", "MTB", "LTB", "TCB", "MR", "BCB"),
  funding_proj = "TBEP",
  lnsz = 1,
  base_size = 12,
  plotly = FALSE,
  family = NA,
  width = NULL,
  height = NULL
)

Arguments

sedimentdata	input sediment data.frame as returned by read_importsediment
param	chr string for which parameter to plot
yrrng	numeric vector indicating min, max years to include, use single year for one year of data
bay_segment	chr string for the bay segment, one to many of "HB", "OTB", "MTB", "LTB", "TCB", "MR", "BCB"
funding_proj	chr string for the funding project, one to many of "TBEP" (default), "TBEP-Special", "Apollo Beach", "Janicki Contract", "Rivers", "Tidal Streams"
lnsz	numeric for line size
base_size	numeric indicating text scaling size for plot
plotly	logical if matrix is created using plotly
family	optional chr string indicating font family for text labels
width	numeric for width of the plot in pixels, only applies of plotly = TRUE
height	numeric for height of the plot in pixels, only applies of plotly = TRUE

Details

Lines for the Threshold Effect Level (TEL) and Potential Effect Level (PEL) are shown for the parameter, if available. Confidence intervals may not be shown for segments with insufficient data.

Value

A ggplot object or a plotly object if plotly = TRUE showing sediment averages and 95% confidence intervals of the selected parameter concentrations for each bay segment

Examples

show_sedimentave(sedimentdata, param = 'Arsenic')

tbep-tech/tbeptools documentation built on April 13, 2025, 4:50 p.m.