show_tbbimatrix: Plot a matrix of Tampa Bay Benthic Index scores over time by...

In tbep-tech/tbeptools: Data and Indicators for the Tampa Bay Estuary Program

Plot a matrix of Tampa Bay Benthic Index scores over time by bay segment

Description

Plot a matrix of Tampa Bay Benthic Index scores over time by bay segment

Usage

show_tbbimatrix(
  tbbiscr,
  bay_segment = c("HB", "OTB", "MTB", "LTB", "TCB", "MR", "BCB", "All", "All (wt)"),
  yrrng = c(1993, 2023),
  alph = 1,
  txtsz = 3,
  family = NA,
  rev = FALSE,
  position = "top",
  plotly = FALSE,
  width = NULL,
  height = NULL
)

Arguments

tbbiscr	input data frame as returned by anlz_tbbiscr
bay_segment	chr string for the bay segment, one to many of "HB", "OTB", "MTB", "LTB", "TCB", "MR", "BCB", "All", "All (wt)"
yrrng	numeric indicating year ranges to evaluate
alph	numeric indicating alpha value for score category colors
txtsz	numeric for size of text in the plot
family	optional chr string indicating font family for text labels
rev	logical if factor levels for bay segments are reversed
position	chr string of location for bay segment labels, default on top, passed to scale_x_discrete
plotly	logical if matrix is created using plotly
width	numeric for width of the plot in pixels, only applies of plotly = TRUE
height	numeric for height of the plot in pixels, only applies of plotly = TRUE

Details

Additional summaries are provided for the entire bay, as a summary across categories ("All") and a summary weighted across the relative sizes of each bay segment ("All (wt)").

Value

A ggplot object showing trends over time in TBBI scores for each bay segment if plotly = FALSE, otherwise a plotly object

Examples

tbbiscr <- anlz_tbbiscr(benthicdata)
show_tbbimatrix(tbbiscr)

tbep-tech/tbeptools documentation built on April 13, 2025, 4:50 p.m.