CellQc: Cells in the quality control

In tchen-tt/SingleCell: Tools for Single Cell Genomics

Cells in the quality control

Description

Cells in the quality control

Usage

CellQc(object, ...)

## S4 method for signature 'Seurat'
CellQc(
  object,
  min.nFeature_RNA = 200,
  max.nFeature_RNA = Inf,
  max.percent.mt = 5,
  ...
)

Arguments

object	An object
...	Arguments passed to other methods
min.nFeature_RNA	Include cells where at least this many features are detected, default 200
max.nFeature_RNA	Include cells where limits this many features are detected, defalult Inf
max.percent.mt	Include cells where largest proportion of mitochondrial genes, default five percent

Value

Returns the filtered Seruat object.

tchen-tt/SingleCell documentation built on April 22, 2023, 1:50 p.m.