plotMDS: Generation of ggplot graphical representations for MDS...

In tchitchek-lab/MDSRefMaps: What the Package Does in One 'Title Case' Line

Description

This function generates a graphical representation for MDS Reference Maps and MDS Projections. Objects can be shaped and colored using the 'color' and 'shape' parameters. Convex hulls for given sets of objects can also be displayed.

Usage

plotMDS(mds, color = NULL, shape = NULL, polygon = NULL, title = "MDS",
  display.legend = TRUE)

Arguments

mds	a MDS result provided by the 'MDSReferenceMap()', 'MDSProjection()', or 'MDSReferenceMapwithProjection()' functions
color	a vector used to color the points
shape	a vector used for the shape of the points
polygon	a vector used to color the convex hull
title	a character specifying the title of the representation
display.legend	a logical specifying if the graphic legend must be displayed

tchitchek-lab/MDSRefMaps documentation built on May 31, 2019, 7:28 a.m.