non_package_files/Examples___/how_things_should_be_ideas.R

In tdanker/ephys2: Read, analyze and plot HEKA Patchmaster files

# how things schould be for I/t and CRC
# provide only the neccessary information, no additional steps requried

scheme1=make_app_scheme(conc=1,10,100, lp_len=c(15,15,15))

lidotest1 <- HEKA_thing("lidotest.dat", "E-605", 4, cpd="Lidocain", conc=scheme1)
lidotest2 <- HEKA_thing("lidotest.dat", 1, 4)        # experiment by number should also be ok
lidotest3 <- HEKA_thing("lidotest.dat", 1, 4, 1)     # ? allow to select for single sweeps ?

lidotest2$conc = scheme1
lidotest2$cpd  = "Lidocaine"

lidotests <- c(lidtest1, lidotest2, lidotest3)

init_cursor("NaPharm", "min", curMin_, c(0.01,0.015))  
Itplot(lidostests, "min")
CRC(lidotests, "min")

# using the GUI to interactively select, check, and tag elements
tree_with_user_selections <- init_tree("lidotest.dat")              # the simplest invocation
tree_with_user_selections <- init_tree(lidotests, show_all=T)       # makes a tree including all files in lidotests with elements selected and lp info set
showtree(tree_with_user_selections)                                 # to continue the work where we left last time

#extracting from saved tree and plot
lidotests_GUI <- get_selected( tree_with_user_selections, checked=T, tags = "awsome" )                           
Itplot( lidotests_GUI, "min")