pelagichypoxia: pelagichypoxia: A package for re-creating analyses in...

Description data analysis and data loading functions data plotting functions results and other plotting functions

Description

The pelagichypoxia package provides data, R and Stan code for analysis and for plotting. Type help(...) for documentation of data and code

data

ctd_data euphausiid_lengths feeding_data fish_backscatter netdepths zoop_blackscatter zoopcomp

analysis and data loading functions

load_zoop_data, load_dietdata, get_Zoop_numbers_proportions, get_euphausiid_numbers, get_euphausiid_lengths, lood_sa_fish_data, run_all_bayesian_models

data plotting functions

plot_zoop_backscatter_data, plot_temp_profiles, plot_dietcomp_data, plot_pnasc_vs_nasc,

results and other plotting functions

The following can only be run if the entire R project is downloaded to your local machine, as these call files generated by run_all_bayesian_models

compare_loo, calc_dothresh_posterior, plot_backscatter_poseteriors, plot_feeding_posteriors,


tessington/pelagichypoxia documentation built on May 10, 2020, 5:12 p.m.