teunbrand/ggnomics
ggnomics

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Functions
268
Source code
63
Man pages
32
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teunbrand/ggnomics: ggnomics
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API

API for teunbrand/ggnomics
ggnomics

Global functions
.flatstrsplit Source code
.grab_ggplot_internals Source code
.onLoad Source code
.setup_ideogram Source code
BeechHorse Source code
CoordS4 Man page
GeomGenemodel Man page
GeomRange Man page
GreekSoldier Man page
GreekSoldier,ANY-method Man page
GreekSoldier,ANYGenomic-method Man page
GreekSoldier,AtomicList-method Man page
GreekSoldier,Vector-method Man page
GreekSoldier,matrix-method Man page
HelenOfTroy Man page Source code
Nightfall Man page
Nightfall,ANY-method Man page
Nightfall,BeechHorse-method Man page
Nightfall,OakHorse-method Man page
OakHorse Source code
PositionDisjointRanges Man page
RangeS4 Man page
RangeS4Continuous Man page
RangeS4Discrete Man page
S4BreaksMajor Man page
S4BreaksMajor,GRanges-method Man page
S4BreaksMajor,numeric-method Man page
S4BreaksMinor Man page
S4BreaksMinor,ANY,GRanges-method Man page
S4BreaksMinor,numeric,ANY-method Man page
S4ExpandRange Man page
S4ExpandRange,NULL-method Man page
S4ExpandRange,Ranges-method Man page
S4ExpandRange,numeric-method Man page
S4ForceFlat Man page
S4ForceFlat,ANYGenomic,GRanges-method Man page
S4ForceFlat,IntegerRanges,numeric-method Man page
S4ForceFlat,Vector,numeric-method Man page
S4ForceFlat,WoodenHorse,ANY-method Man page
S4ForceFlat,knownContinuous,numeric-method Man page
S4LabelFormat Man page
S4LabelFormat,ANY-method Man page
S4LabelFormat,ANYGenomic-method Man page
S4LabelFormat,WoodenHorse-method Man page
S4Range Man page
S4Range,GenomicRanges-method Man page
S4Range,Ranges-method Man page
S4Range,Rle-method Man page
S4Range,WoodenHorse-method Man page
S4Range,knownContinuous-method Man page
S4Train Man page
S4Train,ANY,ANY-method Man page
S4Train,Factor,ANY-method Man page
S4Train,GenomicRanges,GRanges_OR_missing-method Man page
S4Train,IntegerRanges,numeric_OR_missing-method Man page
S4Train,NULL,ANY-method Man page
S4Train,Rle,ANY-method Man page
S4Train,WoodenHorse,ANY-method Man page
S4Train,knownDiscretes,knownDiscretes_OR_missing-method Man page
S4ZeroRange Man page
S4ZeroRange,Ranges-method Man page
S4ZeroRange,numeric-method Man page
S4_colour_scales Man page
S4_continuous_scale Source code
S4_discrete_scale Source code
ScaleGenomic Man page
ScaleS4 Man page
ScaleS4Continuous Man page
ScaleS4ContinuousPosition Man page
ScaleS4Discrete Man page
ScaleS4DiscretePosition Man page
TheFallOfTroy Man page
ViewScaleS4 Man page
ViewScaleS4Secondary Man page
WoodenHorse-vctr Man page
`[.BeechHorse` Source code
`[<-.BeechHorse` Source code
`[<-.OakHorse` Source code
`[[.BeechHorse` Source code
`[[<-.BeechHorse` Source code
assemble_axis_grobs_ideogram Source code
basepair_label Man page
build_axis_elements Source code
build_axis_labels Source code
build_axis_line Source code
build_axis_ticks Source code
build_ideogram Source code
censorThis Man page
censorThis,WoodenHorse,ANY-method Man page
censorThis,numeric,numeric_OR_missing-method Man page
clevels Source code
compute_coverage_Ranges Source code
compute_coverage_numeric Source code
coord_S4 Man page Source code
copy_method Source code
default_ideogram_colours Source code
discardOob Man page
discardOob,ANY,missing-method Man page
discardOob,GenomicRanges,GenomicRanges-method Man page
discardOob,WoodenHorse,ANY-method Man page
discardOob,numeric,numeric-method Man page
discrete_training Source code
draw_genomic_axis Source code
draw_ideogram_axis Source code
est_accuracy Source code
example_genemodels Man page Source code
exontype_palette Source code
expand_limits_continuous_S4 Source code
expand_limits_discrete_S4 Source code
expand_range5 Source code
expand_scale_limits_S4 Source code
format.BeechHorse Source code
format.OakHorse Source code
format.Vector Source code
format_guide_key Source code
fortify-methods-S4 Man page
fortify.DataFrame Man page Source code
fortify.Vector Man page Source code
geom_genemodel Man page Source code
geom_range Man page Source code
ggnomics Man page
ggnomics-package Man page
ggnomics_extensions Man page
ggplot.Vector Source code
ggproto_sibling Source code
guide_gengrob.genomic_axis Man page Source code
guide_gengrob.ideogram_axis Man page Source code
guide_genomic_axis Man page Source code
guide_ideogram_axis Man page Source code
guide_train.genomic_axis Man page Source code
guide_train.ideogram_axis Man page Source code
guide_transform.genomic_axis Man page Source code
guide_transform.ideogram_axis Man page Source code
ideo_cache_get Source code
is.finite.WoodenHorse Source code
is.infinite.WoodenHorse Source code
is.na.BeechHorse Source code
is.na.OakHorse Source code
is_discrete_like Source code
label_basepair Man page Source code
levels.WoodenHorse Source code
makeContent.arrowline Source code
makeContent.genemodel Man page Source code
makeContext.ideogrob Man page Source code
new_S4_continuous_range Source code
new_S4_discrete_range Source code
obj_print_header.WoodenHorse Man page Source code
position_disjoint_ranges Man page Source code
roundcorner Source code
scale_S4_continuous Man page
scale_S4_discrete Man page
scale_colour_S4_continuous Man page Source code
scale_colour_S4_discrete Man page
scale_colour_S4_gradient Man page Source code
scale_colour_S4_hue Man page Source code
scale_colour_S4_viridis_c Man page Source code
scale_exontype_discrete Man page Source code
scale_fill_S4_continuous Man page Source code
scale_fill_S4_discrete Man page
scale_fill_S4_gradient Man page Source code
scale_fill_S4_hue Man page Source code
scale_fill_S4_viridis_c Man page Source code
scale_genomic Man page
scale_type.ANYGenomic Source code
scale_type.Factor Source code
scale_type.Rle Source code
scale_type.Vector Source code
scale_type.WoodenHorse Source code
scale_x_S4_continuous Man page Source code
scale_x_S4_discrete Man page Source code
scale_x_genomic Man page Source code
scale_y_S4_continuous Man page Source code
scale_y_S4_discrete Man page Source code
scale_y_genomic Man page Source code
seqlevels_from_max Source code
setup_axis_labels Source code
setup_axis_line Source code
setup_axis_params Source code
setup_ideograms Man page
setup_ideograms,character,ANY-method Man page
setup_ideograms,data.frame,ANY-method Man page
setup_ideograms,missing_OR_NULL,character-method Man page
setup_tickmarks Source code
squishThis Man page
squishThis,ANYGenomic,GRanges-method Man page
squishThis,IntegerRanges,numeric_OR_missing-method Man page
squishThis,Rle,numeric_OR_missing-method Man page
squishThis,WoodenHorse,ANY-method Man page
squishThis,numeric,numeric_OR_missing-method Man page
squish_infiniteThis Man page
squish_infiniteThis,Rle,numeric_OR_missing-method Man page
squish_infiniteThis,WoodenHorse,numeric_OR_missing-method Man page
squish_infiniteThis,numeric,numeric_OR_missing-method Man page
stat_coverage Man page Source code
style_intron_arrowline Source code
style_intron_chevron Source code
style_intron_plainline Source code
try_is_infinite Source code
try_require Source code
validate_labels Source code
vec_arith.WoodenHorse Man page Source code
vec_arith.WoodenHorse.MISSING Source code
vec_arith.WoodenHorse.WoodenHorse Man page Source code
vec_arith.WoodenHorse.default Man page Source code
vec_cast.BeechHorse Man page Source code
vec_cast.BeechHorse.BeechHorse Man page Source code
vec_cast.OakHorse Man page Source code
vec_cast.OakHorse.OakHorse Man page Source code
vec_math.WoodenHorse Man page Source code
vec_ptype2.BeechHorse Man page Source code
vec_ptype2.BeechHorse.BeechHorse Man page Source code
vec_ptype2.OakHorse Man page Source code
vec_ptype2.OakHorse.OakHorse Man page Source code
vec_ptype_abbr.WoodenHorse Man page Source code
vec_ptype_full.WoodenHorse Man page Source code
view_scale_primaryS4 Source code
view_scale_secondaryS4 Source code
view_scales_from_scale_S4 Source code
teunbrand/ggnomics documentation built on Aug. 2, 2020, 7:34 p.m.

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