Description Usage Arguments Value
Obtain the Diffusion operator
1 | get_diffusion(counts, index = NULL, k1 = 10, k2 = 20)
|
counts |
An n by p matrix of counts with cells in rows and genes in columns. |
index |
(Optional:) an index vector for the rows of counts used to compute local distance. |
k1 |
Tuning parameter. |
k2 |
Tuning parameter. |
A diffusion object.
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