Man pages for thartbm/SMCL
Utilities for common tasks in the SensoriMotor Control Lab.
| asymptoticDecayFit | Fit an asymptotic decay model to reach deviations. |
| asymptoticDecayModel | Execute a simple model given parameters and a reach deviation... |
| asymptoticDecayMSE | Get the MSE for how well an asymptotic decay model fits... |
| bootstrapNormalPeakCI | Bootstrap the 95% confidence interval of a normal function. |
| calibrationParameters | Calibrate coordinates in one reference frame to another. |
| calibrationPolynomial | Apply calibration polynomial to new measurements. |
| circleCorrect | Shift localization responses so they are centred on the... |
| circleErrors | Get mean squared error between coordinates and a circle |
| circleFit | Fit a circle to data |
| confidenceEllipse | Get coordinates of a confidence ellipse. |
| convert2cm | Conversion from the standard units of our lab's equipment to... |
| convertCellToNumVector | Convert list in Pavlovia CSV to R vector |
| coordW | Get parameter weights for converting between reference... |
| density2D | Create matrix representing 2D density. |
| etaSquaredTtest | Get an eta-squared effect size to accompany a t-test. |
| ezANOVA.pes | ezANOVA wrapper to calculate partial eta squared |
| fitNormal | Fit a normal function to a set of values at given positions. |
| fitSkewNormal | Fit a skewed normal function to x and y coordinates. |
| generateRandomIDs | Generate random participant IDs |
| getConfidenceInterval | Get a confidence interval for a summary statistic of a... |
| getReachAngleAt | Angular deviation of a reach from target at a specific point. |
| getSplinedTrajectory | Get smooth splined coordinate interpolation over time |
| getSplinedVelocity | Get velocity profile after spline interpolation |
| ginv | MASS ginv: generalized Moore-Penrose pseudo-inverse |
| hist2d | Get frequencies for a 2D histogram |
| linPal | Create linear palette in RGB color space |
| localization_aligned | Aligned localization data points to illustrate circle-fitting |
| localization_unaligned | Non-aligned localization data points to illustrate... |
| mixCol | Linearly mix two colors given some weights. |
| modelCriteriaMSE | Calculate model evaluation criteria (mainly AIC). |
| normal | Evaluates a normal function at specific locations. |
| normalErrors | Calculate the MSE between a normal function and data. |
| oneRateFit | Fit the one-rate model to reach deviations. |
| oneRateModel | Evaluate a one-rate model given parameters and a reach... |
| oneRateMSE | Get the MSE for how well the one-rate model fits reaches. |
| polarHeatMap | Create a plot with a polar heatmap. |
| relativeLikelihood | Calculate relative likelihood of models based on information... |
| rotateCoordinates | Rotate 2D trajectory |
| satCol | Modify a color's saturation |
| seriesEffectiveSampleSize | Estimate number of independent samples in a time series. |
| simpleRateFit | Fit the simple learning rate model to reach deviations. |
| simpleRateModel | Evaluate a simple learning rate model given parameters and a... |
| simpleRateMSE | Get the MSE for how well a simple learning rate model fits... |
| skewNormal | Evaluates a normal function at specific locations. |
| skewNormalErrors | Calculate the MSE between a skewed normal function and data. |
| t_col | Set a color's alpha to a percentage. |
| trimReach | Trim a data frame describing a reach to the interesting part. |
| tworatedata | Rotation adaptation data for use with the two-rate model |
| twoRateFit | Fit the two-rate model to reach deviations. |
| twoRateModel | Evaluate the two-rate model given parameters and a reach... |
| twoRateMSE | Get the MSE for how well the two-rate model fits reaches. |
| twoRates | Evaluate two-rate model fits. |
| zerocrossings | Where does a signal cross zero? |
