compute_cell_stats: Summarize tracking data

In theMILOlab/cypro: A Toolbox for Analysis of Single Cell Microscopy Data

Summarize tracking data

Description

Summarize tracking data

Usage

compute_cell_stats(df, phase, verbose, object)

compute_stat(track_df)

Arguments

track_df

A data.frame in which each observation refers to a cell at a given frame and that contains the following variables: cell_id Character. Refers to the cell id's. x_coords Numeric. Refers to the cell's x-coordinates. y_coords Numeric. Refers to the cell's y-coordinates. dfo Numeric. The distances from the first position tracked. (Distance from origin). dfpl Numeric. The distances from the last point. speed Numeric. Refers to the instantaneuous speed. afo Numeric. The angle from the position of origin. aflp Numeric. The angle from the last position. frame_num Numeric. The frame number the observation refers to. frame_time Numeric. The frame number multiplied with the interval between two frames frame_itvl Character. The frame time combined with the intervals unit

Value

A summarized data.frame.

theMILOlab/cypro documentation built on April 5, 2022, 2:03 a.m.