buildPolylist: Build a human-readable matrix of samples, analytes, and...

In thebustalab/phylochemistry: Chemical and Sequence Analyses in a Phylogenetic Context

Description

Build a human-readable matrix of samples, analytes, and measurements

Usage

buildPolylist(
  samples_monolist_in_path,
  analytes_monolist_in_path,
  measurements_monolist_in_path = NULL,
  centroid = "~~~",
  polylist_out_path
)

Arguments

samples_monolist_in_path	The monolist of samples to be used in building the polylist. Should contain a column "sample_unique_ID".
analytes_monolist_in_path	The monolist of analytes to be used in building the polylist. Should contain a column "analyte_unique_ID".
measurements_monolist_in_path	The monolist of measurements to be used in building the polylist. Should contain columns "sample_unique_ID", "analyte_unique_ID", and a column of values corresponding to measurements
centroid	The characters to use in the centroid
polylist_out_path	The path to which the polylist should be written

thebustalab/phylochemistry documentation built on Sept. 3, 2021, 5:06 a.m.