Files in thednainus/sarscov2simulations

Script to simulate phylogenetic trees and sequence data for SARS-CoV-2

Coalescent_simulations/DNA_seqali_simulations.R Coalescent_simulations/Tree_Simulations.R Coalescent_simulations/plot_trajetories.R Coalescent_simulations/seijrRmodel.R

DESCRIPTION

NAMESPACE

Output_Example/sim1._dedup.fasta

Output_Example/sim1.fasta

R/simulations.R README.md man/createSample_states.Rd man/createSample_times.Rd man/create_tip_names.Rd man/rename_tips.Rd man/sampler.Rd man/simulate_dna.Rd man/write_ali.Rd

sarscov2simulations.Rproj

thednainus/sarscov2simulations documentation built on Feb. 9, 2023, 2:12 p.m.