guo: Guo at al. mouse embryonic stem cell qPCR data
In theislab/destiny: Creates diffusion maps
guo R Documentation
Guo at al. mouse embryonic stem cell qPCR data
Description
Gene expression data of 48 genes and an annotation column $num_cells containing the cell stage at which the embryos were harvested.
Usage
data(guo)
data(guo_norm)
Format
An ExpressionSet with 48 features, 428 observations and 2 phenoData annotations.
Details
The data is normalized using the mean of two housekeeping genes.
The difference between guo and guo_norm is the LoD being set to 10 in the former, making it usable with the censor_val parameter of DiffusionMap.
Value
an ExpressionSet with 48 features and 428 observations containing qPCR Ct values and a "num.cells" observation annotation.
Author(s)
Guoji Guo, Mikael Huss, Guo Qing Tong, Chaoyang Wang, Li Li Sun, Neil D. Clarke, Paul Robson robsonp@gis.a-star.edu.sg
References
http://www.sciencedirect.com/science/article/pii/S1534580710001103
theislab/destiny documentation built on Nov. 19, 2024, 5:43 a.m.
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| guo | R Documentation |
Guo at al. mouse embryonic stem cell qPCR data
Description
Gene expression data of 48 genes and an annotation column $num_cells containing the cell stage at which the embryos were harvested.
Usage
data(guo)
data(guo_norm)
Format
An ExpressionSet with 48 features, 428 observations and 2 phenoData annotations.
Details
The data is normalized using the mean of two housekeeping genes.
The difference between guo and guo_norm is the LoD being set to 10 in the former, making it usable with the censor_val parameter of DiffusionMap.
Value
an ExpressionSet with 48 features and 428 observations containing qPCR Ct values and a "num.cells" observation annotation.
Author(s)
Guoji Guo, Mikael Huss, Guo Qing Tong, Chaoyang Wang, Li Li Sun, Neil D. Clarke, Paul Robson robsonp@gis.a-star.edu.sg
References
http://www.sciencedirect.com/science/article/pii/S1534580710001103
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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