theislab/zellkonverter: Conversion Between scRNA-seq Objects

Provides methods to convert between Python AnnData objects and SingleCellExperiment objects. These are primarily intended for use by downstream Bioconductor packages that wrap Python methods for single-cell data analysis. It also includes functions to read and write H5AD files used for saving AnnData objects to disk.

Getting started

Package details

Bioconductor views DataImport DataRepresentation SingleCell
Maintainer
LicenseMIT + file LICENSE
Version1.3.0
URL https://github.com/theislab/zellkonverter
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("theislab/zellkonverter")
theislab/zellkonverter documentation built on May 20, 2021, 7:39 p.m.