which_codon: which_codon
In theron-palmer/splicemute: splicemute
Description
Usage
Arguments
Value
View source: R/functions.R
View source: R/.ipynb_checkpoints/functions-checkpoint.R
Description
which_codon
Usage
1
which_codon(cod, tx_junc_loc, start_loc, stop_loc)
Arguments
cod
DNAstring containing codon start and end coordinates
tx_junc_loc
The junction location in the transcript
start_loc
start codon location in peptide coordinates relative to whole transcript
stop_loc
stop codon location in peptide coordinates relative to whole transcript
Value
junction location in translated protein coordinates or tx_junc_loc if in UTR
theron-palmer/splicemute documentation built on Jan. 8, 2022, 10:36 a.m.
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Description Usage Arguments Value
View source: R/functions.R View source: R/.ipynb_checkpoints/functions-checkpoint.R
Description
which_codon
Usage
1 | which_codon(cod, tx_junc_loc, start_loc, stop_loc)
|
Arguments
cod |
DNAstring containing codon start and end coordinates |
tx_junc_loc |
The junction location in the transcript |
start_loc |
start codon location in peptide coordinates relative to whole transcript |
stop_loc |
stop codon location in peptide coordinates relative to whole transcript |
Value
junction location in translated protein coordinates or tx_junc_loc if in UTR
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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