getClinicalData: extract annotations from MAF object
In thesushantpatil/maftools: Summarize, Analyze and Visualize MAF Files
Description
Usage
Arguments
Value
Examples
Description
extract annotations from MAF object
Usage
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getClinicalData(x)
## S4 method for signature 'MAF'
getClinicalData(x)
Arguments
x
An object of class MAF
Value
annotations associated with samples in MAF
Examples
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laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools")
laml <- read.maf(maf = laml.maf)
getClinicalData(x = laml)
thesushantpatil/maftools documentation built on May 18, 2020, 9:54 p.m.
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Description Usage Arguments Value Examples
Description
extract annotations from MAF object
Usage
1 2 3 4 | getClinicalData(x)
## S4 method for signature 'MAF'
getClinicalData(x)
|
Arguments
x |
An object of class MAF |
Value
annotations associated with samples in MAF
Examples
1 2 3 | laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools")
laml <- read.maf(maf = laml.maf)
getClinicalData(x = laml)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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