plot-multidna-method: Display multidna objects

In thibautjombart/apex: Phylogenetic Methods for Multiple Gene Data

Display multidna objects

Description

Default printing for multidna objects

Usage

## S4 method for signature 'multidna'
plot(x, y, rows = TRUE, ask = FALSE, ...)

Arguments

x	a multidna object
y	an integer vector indicating the genes to plot
rows	a logical indicating if different genes should be displayed in separate rows
ask	a logical indicating if the user should be prompted between graphs
...	arguments passed to image.DNAbin

Author(s)

Thibaut Jombart [e-mail]

Examples

## simple conversion with nicely ordered output
data(woodmouse)
genes <- list(gene1=woodmouse[,1:500], gene2=woodmouse[,501:965])
x <- new("multidna", genes)
x
plot(x)

thibautjombart/apex documentation built on Feb. 7, 2024, 7:13 a.m.