make_dibbler: Process input data for dibbler
In thibautjombart/dibbler: Investigation of Food-Borne Disease Outbreaks

Description Usage Arguments Value Author(s) Examples

This function combines data of a food distribution network (including cases as terminal nodes) and additional information on the nodes (typically a linelist) to create a dibbler object. The S3 class dibbler is an extension of the epicontacts objects implemented in the similarly named package.

1	make_dibbler(net, nodes_data, from = 1L, to = 2L, id = 1L)

`net`	A `data.frame` defining the edges of the food distribution network with at least two columns representing source and receiver nodes (i.e., 'from' and 'to'). This network is meant to include cases, which will be seen as terminal nodes. Labels used in these columns will be matched against `nodes_data`. Other columns are optional and will be kept as edge attributes.
`nodes_data`	A `data.frame` containing additional information on the nodes of the network. Typically, this will be a linelist providing data on the reported cases.
`from`	An integer or character string indicating the column in `net` containing source nodes ('from' column).
`to`	An integer or character string indicating the column in `net` containing receiving nodes ('to' column).
`id`	An integer or character string indicating the column in `nodes_data` containing unique case identifiers. These will be matched against the nodes of the network described in `net`.

a list of data suitable for input for dibbler

Thibaut Jombart thibautjombart@gmail.com

if (require(outbreaks)) {

  v_data <- s_enteritidis_pt59$graph
  n_data <- data.frame(id = names(s_enteritidis_pt59$cluster),
                       cluster = s_enteritidis_pt59$cluster)

  x <- make_dibbler(v_data, n_data)
  x
}