raw.fixInvalidFile: Fix invalid data filename

In thomasgredig/RAWdataR: Scientifically Reproducible RAW Data Processing

Fix invalid data filename

Description

Fix invalid data filename

Usage

raw.fixInvalidFile(
  filename,
  addInstrument = "",
  addUser = "",
  addProject = "",
  addSample = "",
  renameFile = FALSE
)

Arguments

filename	name of file
addInstrument	instrument to be added
addUser	user to be added
addProject	project to be added
addSample	sample to be added
renameFile	if TRUE file will be renamed

Value

returns fixed filenames

Examples

f = raw.findFiles(raw.getSamplePath(), instrument='MM160622SI1')
print(f)
f.new = raw.fixInvalidFile(f, addInstrument='vsm')
print(paste("Old name:",f))
print(paste("New name:",f.new))

thomasgredig/RAWdataR documentation built on Nov. 6, 2024, 9:46 a.m.