Files in thomasp85/MSGFplus-release
An interface between R and MS-GF+
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/MSGFplus-package.R
R/aaa.R
R/generics.R
R/msgfAsync.R
R/msgfPar-getters.R
R/msgfPar.R
R/msgfParChargeRange.R
R/msgfParEnzyme.R
R/msgfParFragmentation.R
R/msgfParGUI.R
R/msgfParInstrument.R
R/msgfParIsotopeError.R
R/msgfParLengthRange.R
R/msgfParMatches.R
R/msgfParModification.R
R/msgfParModificationList.R
R/msgfParNtt.R
R/msgfParProtocol.R
R/msgfParTda.R
R/msgfParTolerance.R
R/zzz.R
README.html
README.md
inst/extdata/milk-proteins.fasta
man/MSGFplus-package.Rd
man/chargeRange.Rd
man/db.Rd
man/enzyme.Rd
man/fragmentation.Rd
man/getMSGFpar.Rd
man/instrument.Rd
man/isotopeError.Rd
man/lengthRange.Rd
man/matches.Rd
man/mods.Rd
man/msgfAsync-class.Rd
man/msgfPar-class.Rd
man/msgfPar.Rd
man/msgfParChargeRange-class.Rd
man/msgfParEnzyme-class.Rd
man/msgfParFragmentation-class.Rd
man/msgfParFromID.Rd
man/msgfParGUI.Rd
man/msgfParInstrument-class.Rd
man/msgfParIsotopeError-class.Rd
man/msgfParLengthRange-class.Rd
man/msgfParMatches-class.Rd
man/msgfParModification-class.Rd
man/msgfParModificationList-class.Rd
man/msgfParNtt-class.Rd
man/msgfParProtocol-class.Rd
man/msgfParTda-class.Rd
man/msgfParTolerance-class.Rd
man/ntt.Rd
man/protocol.Rd
man/runMSGF.Rd
man/tda.Rd
man/tolerance.Rd
tests/test-all.R
tests/testthat/test_getMSGFpar.R
tests/testthat/test_msgfParChargeRange.R
tests/testthat/test_msgfParEnzyme.R
tests/testthat/test_msgfParFragmentation.R
tests/testthat/test_msgfParInstrument.R
tests/testthat/test_msgfParIsotopeError.R
tests/testthat/test_msgfParLengthRange.R
tests/testthat/test_msgfParMatches.R
tests/testthat/test_msgfParModification.R
tests/testthat/test_msgfParModificationList.R
tests/testthat/test_msgfParNtt.R
tests/testthat/test_msgfParProtocol.R
tests/testthat/test_msgfParTda.R
tests/testthat/test_msgfParTolerance.R
tests/testthat/test_setGet.R
vignettes/Using_MSGFplus.Rmd
vignettes/styles.css
