Files in thomasp85/MSsary
LC-MS/MS analysis in R
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/MSsary-package.R
R/MsChromList.R
R/MsConnections.R
R/MsData.R
R/MsDataSet.R
R/MsGroupList.R
R/MsIonList.R
R/MsList.R
R/MsPeakList.R
R/MsScanList.R
R/MsSet.R
R/RcppExports.R
R/ShallowMsList.R
R/aaa.R
R/augmentationMethods.R
R/filters.R
R/generics.R
R/groupMethods.R
R/linkMethods.R
R/methodStore.R
R/peakMethods.R
R/prepareMethods.R
R/retentionMethods.R
R/scanMethods.R
R/tableFormats.R
R/zzz.R
README.md
inst/extdata/Shew_slice1.mzML
man/MSsary-package.Rd
man/MsChromList-class.Rd
man/MsConnections-class.Rd
man/MsData-class.Rd
man/MsDataSet-class.Rd
man/MsIonList-class.Rd
man/MsList-accessors.Rd
man/MsList-class.Rd
man/MsPeakList-class.Rd
man/MsScanList-class.Rd
man/MsScanList-navigators.Rd
man/MsSet-class.Rd
man/annotateChildren.Rd
man/binIons.Rd
man/callToString.Rd
man/chroms-MsData-method.Rd
man/chroms-MsIonList-method.Rd
man/chroms-MsPeakList-method.Rd
man/chroms-MsScanList-method.Rd
man/chroms.Rd
man/con.Rd
man/createMsData.Rd
man/createMsDataSet.Rd
man/detectPeaks-MsData-method.Rd
man/detectPeaks.Rd
man/dropEmpty.Rd
man/editHistory.Rd
man/expand.call.Rd
man/fillGaps.Rd
man/findGaps.Rd
man/getContAcqNum.Rd
man/getMzrPath.Rd
man/getPeakIds.Rd
man/ions-MsChromList-method.Rd
man/ions-MsData-method.Rd
man/ions-MsPeakList-method.Rd
man/ions-MsScanList-method.Rd
man/ions.Rd
man/isEmpty.Rd
man/isRaw.Rd
man/loadMsData.Rd
man/loadMsDataSet.Rd
man/massifquant.Rd
man/meltMS.Rd
man/methodStore-class.Rd
man/msPlot.Rd
man/peakMethodStore-class.Rd
man/peaks-MsChromList-method.Rd
man/peaks-MsData-method.Rd
man/peaks-MsIonList-method.Rd
man/peaks-MsScanList-method.Rd
man/peaks.Rd
man/prepareMethodStore-class.Rd
man/prepareScans-MsData-method.Rd
man/prepareScans.Rd
man/rbindGtable.Rd
man/scanMode.Rd
man/scanNoise.Rd
man/scans-MsChromList-method.Rd
man/scans-MsData-method.Rd
man/scans-MsIonList-method.Rd
man/scans-MsPeakList-method.Rd
man/scans.Rd
man/uNames.Rd
src/Makevars
src/RcppExports.cpp
src/massifquant.cpp
src/massifquant/DataStore.cpp
src/massifquant/DataStore.h
src/massifquant/OpOverload.cpp
src/massifquant/OpOverload.h
src/massifquant/SegProc.cpp
src/massifquant/SegProc.h
src/massifquant/TrMgr.cpp
src/massifquant/TrMgr.h
src/massifquant/Tracker.cpp
src/massifquant/Tracker.h
src/massifquant/dpq.h
src/massifquant/nmath.h
src/scanFunctions.cpp
vignettes/Extending_MSsary.Rmd
vignettes/MSsary_intro.Rmd
vignettes/pics/animIon.gif
vignettes/styles.css
