loadMsData: Load in an already created sary file as an MsData object

In thomasp85/MSsary: LC-MS/MS analysis in R

Description

This function creates a new MsData object from an already created sary file, together with the accompanying raw data file. The function automatically checks the sary file and see if it complies with the format. By default it also does a light check on whether the data in the raw file corresponds to the data in the sary file.

Usage

loadMsData(saryFile, rawFile, testIntegrity = TRUE, testSize = 10)

Arguments

saryFile	The path to the sary database file
rawFile	The path to the raw datafile
testIntegrity	Should the raw and sary file be compared to each other
testSize	The number of randomly selected scans to use for comparing raw and sary if testIntegrity=TRUE

Value

An MsData object

See Also

createMsData MsData

thomasp85/MSsary documentation built on May 31, 2019, 11:11 a.m.