plotTrajectory: Plots individual node dynamics

In tianyu-lu/dynUGENE: Dynamical Uncertainty-aware GEne NEtwork inference with random forests

Description

Given the result of simulate() (an object of class "simulation"), plots the dynamics of the specified nodes over time. Specify nodes by their names.

Usage

plotTrajectory(simulation, nodeNames)

Arguments

simulation	The result of simulate().
nodeNames	The names of the nodes to plot. Minimum one name. Maximum six names, as the plot would get cluttered beyond this number. @return Shows a plot of the simulated trajectory.

Examples

## Not run: 
  x0 <- Repressilator[1, 2:7]
  ugene <- inferNetwork(Repressilator)
  trajectory <- simulateUGENE(ugene, x0)
  plotTrajectory(trajectory, c("p3", "p2", "p1"))

## End(Not run)

tianyu-lu/dynUGENE documentation built on Jan. 7, 2021, 6:27 p.m.