context("survival-pyears")
skip_on_cran()
skip_if_not_installed("modeltests")
library(modeltests)
skip_if_not_installed("survival")
library(survival)
temp.yr <- tcut(mgus$dxyr, 55:92, labels = as.character(55:91))
temp.age <- tcut(mgus$age, 34:101, labels = as.character(34:100))
ptime <- ifelse(is.na(mgus$pctime), mgus$futime, mgus$pctime)
pstat <- ifelse(is.na(mgus$pctime), 0, 1)
fit <- pyears(
Surv(ptime / 365.25, pstat) ~ temp.yr + temp.age + sex, mgus,
data.frame = TRUE
)
fit2 <- pyears(
Surv(ptime / 365.25, pstat) ~ temp.yr + temp.age + sex, mgus,
data.frame = FALSE
)
test_that("pyears tidier arguments", {
check_arguments(tidy.pyears)
check_arguments(glance.pyears)
})
test_that("tidy.pyears", {
td <- tidy(fit)
td2 <- tidy(fit2)
check_tidy_output(td, strict = FALSE)
check_tidy_output(td2, strict = FALSE)
})
test_that("glance.pyears", {
gl <- glance(fit)
gl2 <- glance(fit2)
check_glance_outputs(gl, gl2)
})
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