| addCohort | Add another cohort to the soil profile |
| animateCohorts | Animate sediment cohorts |
| animateCohortTransect | Animate sediment cohorts across an elevation transect |
| buildHighTideScenario | Build high tides into scenario table |
| buildScenarioCurve | Build scenario sea-level curve |
| calculateDepthOfNonRootVolume | Depth of the given soil volume |
| convertProfileAgeToDepth | Convert soil profile from age to depth based cohorts |
| convertZStarToZ | Convert from Z* to elevation |
| convertZToZstar | Convert elevation to Z* |
| deliverSediment | Calculate delivered sediment over one or more types of tides |
| determineInitialCohorts | Determine the initial conditions for a set of cohorts |
| fillDepthCellsWithRoots | Calculates a root mass depth profile |
| floodTimeLinear | Calculate flood time using linear method |
| floodTimeTrig | Calculate flood time using trigonometric method |
| massLiveRoots | Mass of living roots |
| predictBiomass | Predict aboveground biomass |
| predictLunarNodalCycle | Predict lunar nodal cycle |
| runCohortMem | Run Marsh Equilibrium Model with Cohorts |
| runCohortMemTransect | Run Marsh Equilibrium Model with Cohorts Across an Elevation... |
| runMultiSpeciesBiomass | Run Multiple Species Biomass Functions |
| runToEquilibrium | Run to equilibrium with proscribed surface mineral input |
| sedimentInputs | Annual mineral inputs into marsh surface |
| simulateSetData | Simulate SET Data |
| simulateSoilCore | Simulate a sediment core from a set of cohorts |
| trimCohorts | Trim cohorts |
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