addCohort | Add another cohort to the soil profile |
animateCohorts | Animate sediment cohorts |
animateCohortTransect | Animate sediment cohorts across an elevation transect |
buildHighTideScenario | Build high tides into scenario table |
buildScenarioCurve | Build scenario sea-level curve |
calculateDepthOfNonRootVolume | Depth of the given soil volume |
convertProfileAgeToDepth | Convert soil profile from age to depth based cohorts |
convertZStarToZ | Convert from Z* to elevation |
convertZToZstar | Convert elevation to Z* |
deliverSediment | Calculate delivered sediment over one or more types of tides |
determineInitialCohorts | Determine the initial conditions for a set of cohorts |
fillDepthCellsWithRoots | Calculates a root mass depth profile |
floodTimeLinear | Calculate flood time using linear method |
floodTimeTrig | Calculate flood time using trigonometric method |
massLiveRoots | Mass of living roots |
predictBiomass | Predict aboveground biomass |
predictLunarNodalCycle | Predict lunar nodal cycle |
runCohortMem | Run Marsh Equilibrium Model with Cohorts |
runCohortMemTransect | Run Marsh Equilibrium Model with Cohorts Across an Elevation... |
runMultiSpeciesBiomass | Run Multiple Species Biomass Functions |
runToEquilibrium | Run to equilibrium with proscribed surface mineral input |
sedimentInputs | Annual mineral inputs into marsh surface |
simulateSetData | Simulate SET Data |
simulateSoilCore | Simulate a sediment core from a set of cohorts |
trimCohorts | Trim cohorts |
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