coverageSurvival: Coverage Survival
In timoast/methylQC: Examine the Quality of Methylome Data
Description
Usage
Arguments
Value
Examples
Description
Find the diminishing percentage of cytosines with increasing sequencing depth
Usage
1
coverageSurvival(data, cytosines, chromosome = "all")
Arguments
data
A dataframe
cytosines
Dataframe with cytosine counts. Can be generated using methylQC::cytosines()
chromosome
Chromosome number. Defaults to all (all chromosomes)
Value
a dataframe
Examples
1
coverage <- coverageSurvival(data = methylome, cytosines = arabidopsis, chromosome = "chr1")
timoast/methylQC documentation built on May 31, 2019, 2:28 p.m.
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Description Usage Arguments Value Examples
Description
Find the diminishing percentage of cytosines with increasing sequencing depth
Usage
1 | coverageSurvival(data, cytosines, chromosome = "all")
|
Arguments
data |
A dataframe |
cytosines |
Dataframe with cytosine counts. Can be generated using methylQC::cytosines() |
chromosome |
Chromosome number. Defaults to all (all chromosomes) |
Value
a dataframe
Examples
1 | coverage <- coverageSurvival(data = methylome, cytosines = arabidopsis, chromosome = "chr1")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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