loadData: Load Data

Description Usage Arguments Value Examples

Description

This function will load the dataset to be used in methylQC functions

Usage

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loadData(path, datasource = "BSseeker2", forceZipped = FALSE)

Arguments

path

Path to the data. Input can be gzipped or raw text.

datasource

Which bisulfite package was used? Defaults to BSseeker2

forceZipped

force data to be read as gzip. Default is to detect from the file extension.

Value

a datatable

Examples

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## Not run: 
loadData("methylome.CGmap.gz")

## End(Not run)

timoast/methylQC documentation built on May 31, 2019, 2:28 p.m.