Man pages for tjbencomo/TBmisc
Miscellaneous functions for working with biomedical data
| check_genes | Correct old or Excel damaged HGNC symbols |
| extract_aa | Extract Amino Acid Variant |
| extract_position | Extract Amino Acid Variant Position |
| load_cnv | Load dataframe with Gistic2 thresholded CNV data |
| load_cohort | Load dataframe clinical info and optional RNASeq and CNV data |
| load_cohorts | Load multiple TCGA studies at once |
| load_rnaseq | Load dataframe with RNASeq data |
| pipe | Pipe operator |
| split_aachange | Split protein sequence variant column into individual columns... |
| transpose_data | Swap axes of the dataframe. Patients are now rows and other... |
