spectra_matrix: Spectra data to test addSpectralSimilarity
In tnaake/MetNet: Inferring metabolic networks from untargeted high-resolution mass spectrometry data
spectra_matrix R Documentation
Spectra data to test addSpectralSimilarity
Description
spectra_matrix contains one selected putative
annotation of x_test. Missing annotations are filled with ‘NA'’s.
It will be used as an example annotation in the vignette to show the
functionality of the package.
Format
matrix
Value
matrix
Author(s)
Liesa Salzer, liesa.salzer@helmholtz-muenchen.de
Source
library(MsCoreUtils)
library(Spectra)
f <- system.file("spectra_matrix/ms2_test.RDS", package = "MetNet")
sps_sub <- readRDS(f)
adj_spec <- Spectra::compareSpectra(sps_sub, FUN = ndotproduct)
colnames(adj_spec) <- sps_sub$id
rownames(adj_spec) <- sps_sub$id
tnaake/MetNet documentation built on Feb. 21, 2023, 12:20 p.m.
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| spectra_matrix | R Documentation |
Spectra data to test addSpectralSimilarity
Description
spectra_matrix contains one selected putative
annotation of x_test. Missing annotations are filled with ‘NA'’s.
It will be used as an example annotation in the vignette to show the
functionality of the package.
Format
matrix
Value
matrix
Author(s)
Liesa Salzer, liesa.salzer@helmholtz-muenchen.de
Source
library(MsCoreUtils) library(Spectra)
f <- system.file("spectra_matrix/ms2_test.RDS", package = "MetNet") sps_sub <- readRDS(f)
adj_spec <- Spectra::compareSpectra(sps_sub, FUN = ndotproduct) colnames(adj_spec) <- sps_sub$id rownames(adj_spec) <- sps_sub$id
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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