Files in trannhatanh89/HPAanalyze
Retrieve and analyze data from the Human Protein Atlas
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/check-bioc.yml
.gitignore
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/download.R
R/hpa_histology_data.R
R/one.R
R/sysdata.rda
R/utils.R
R/vis.R
R/xml.R
README.Rmd
README.md
_pkgdown.yml
data/hpa_histology_data.rda
data_raw/example_data.R
data_raw/gene_ensembl_lookup_table.R
docs/404.html
docs/LICENSE-text.html
docs/_config.yml
docs/articles/a_HPAanalyze_quick_start.html
docs/articles/a_HPAanalyze_quick_start_files/elevate-section-attrs-2.0/elevate-section-attrs.js
docs/articles/a_HPAanalyze_quick_start_files/figure-html/hpaVisPatho_eg-1.png
docs/articles/a_HPAanalyze_quick_start_files/figure-html/hpaVis_eg-1.png
docs/articles/a_HPAanalyze_quick_start_files/figure-html/hpaVis_eg3-1.png
docs/articles/a_HPAanalyze_quick_start_files/jquery-1.11.3/jquery.min.js
docs/articles/b_HPAanalyze_indepth.html
docs/articles/b_HPAanalyze_indepth_files/elevate-section-attrs-2.0/elevate-section-attrs.js
docs/articles/b_HPAanalyze_indepth_files/figure-html/hpaVis_eg-1.png
docs/articles/b_HPAanalyze_indepth_files/figure-html/visPatho-1.png
docs/articles/b_HPAanalyze_indepth_files/figure-html/visSubcell-1.png
docs/articles/b_HPAanalyze_indepth_files/figure-html/visTissue-1.png
docs/articles/b_HPAanalyze_indepth_files/jquery-1.11.3/jquery.min.js
docs/articles/c_HPAanalyze_case_query.html
docs/articles/c_HPAanalyze_case_query_files/elevate-section-attrs-2.0/elevate-section-attrs.js
docs/articles/c_HPAanalyze_case_query_files/jquery-1.11.3/jquery.min.js
docs/articles/d_HPAanalyze_case_offline_xml.html
docs/articles/d_HPAanalyze_case_offline_xml_files/elevate-section-attrs-2.0/elevate-section-attrs.js
docs/articles/d_HPAanalyze_case_offline_xml_files/jquery-1.11.3/jquery.min.js
docs/articles/e_HPAanalyze_case_json.html
docs/articles/e_HPAanalyze_case_json_files/elevate-section-attrs-2.0/elevate-section-attrs.js
docs/articles/e_HPAanalyze_case_json_files/jquery-1.11.3/jquery.min.js
docs/articles/f_HPAanalyze_case_images.html
docs/articles/f_HPAanalyze_case_images_files/elevate-section-attrs-2.0/elevate-section-attrs.js
docs/articles/f_HPAanalyze_case_images_files/jquery-1.11.3/jquery.min.js
docs/articles/figures/hex.png
docs/articles/figures/query_dropdown.png
docs/articles/figures/query_fields.png
docs/articles/figures/query_search.png
docs/articles/figures/query_tsvlink.png
docs/articles/figures/query_vis.png
docs/articles/figures/workflow.png
docs/articles/index.html
docs/articles/z_HPAanalyze_paper_figures.html
docs/articles/z_HPAanalyze_paper_figures_files/elevate-section-attrs-2.0/elevate-section-attrs.js
docs/articles/z_HPAanalyze_paper_figures_files/jquery-1.11.3/jquery.min.js
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/TP53_EGFR_in_tissue_cancer.xlsx.xlsx
docs/reference/hpaDownload.html
docs/reference/hpaExport.html
docs/reference/hpaListParam.html
docs/reference/hpaVis-1.png
docs/reference/hpaVis.html
docs/reference/hpaVisPatho-1.png
docs/reference/hpaVisPatho.html
docs/reference/hpaVisSubcell-1.png
docs/reference/hpaVisSubcell.html
docs/reference/hpaVisTissue-1.png
docs/reference/hpaVisTissue.html
docs/reference/hpaXml.html
docs/reference/hpaXmlAntibody.html
docs/reference/hpaXmlGet.html
docs/reference/hpaXmlProtClass.html
docs/reference/hpaXmlTissueExpr.html
docs/reference/hpaXmlTissueExprSum.html
docs/reference/hpa_downloaded_histology_v18.html
docs/reference/hpa_histology_data.html
docs/reference/index.html
inst/CITATION
man/hpaDownload.Rd
man/hpaExport.Rd
man/hpaListParam.Rd
man/hpaVis.Rd
man/hpaVisPatho.Rd
man/hpaVisSubcell.Rd
man/hpaVisTissue.Rd
man/hpaXml.Rd
man/hpaXmlAntibody.Rd
man/hpaXmlGet.Rd
man/hpaXmlProtClass.Rd
man/hpaXmlTissueExpr.Rd
man/hpaXmlTissueExprSum.Rd
man/hpa_histology_data.Rd
vignettes/a_HPAanalyze_quick_start.Rmd
vignettes/b_HPAanalyze_indepth.Rmd
vignettes/c_HPAanalyze_case_query.Rmd
vignettes/d_HPAanalyze_case_offline_xml.Rmd
vignettes/data/ENSG00000134057.xml
vignettes/data/copyright
vignettes/e_HPAanalyze_case_json.Rmd
vignettes/f_HPAanalyze_case_images.Rmd
vignettes/figures/hex.png
vignettes/figures/query_dropdown.png
vignettes/figures/query_fields.png
vignettes/figures/query_search.png
vignettes/figures/query_tsvlink.png
vignettes/figures/query_vis.png
vignettes/figures/workflow.png
vignettes/z_HPAanalyze_paper_figures.Rmd
