Man pages for travis-m-blimkie/networker
Reproducible PPI Network Creation and Visualization in R

biomart_id_mapping_humanHuman gene ID mappings from biomaRt
build_networkConstruct a PPI network from input genes and InnateDB's...
clean_networkClean graphml input
enrich_networkTest a tidygraph network object for enriched Reactome...
extract_subnetworkExtract a subnetwork based on pathway genes
innatedb_expExperimentally verified human PPI data downloaded from...
integrate_networksCombine two (or more?) gene lists into a single integrated...
plot_networkPlot an undirected PPI network using ggraph
remove_subnetworksFind and return the largest subnetwork
travis-m-blimkie/networker documentation built on June 3, 2023, 10:17 p.m.