RONKSvariants: RONKSvariants: mitochondrial variant calls from RONKSreads
In trichelab/MTseekerData: Supporting Data for the MTseeker Package
Description
Usage
Format
Source
Examples
Description
RONKS == "Renal Oncocytoma, Normal Kidney Sample" matched by patient
This object was produced by applying MTseeker::callMT() to PRJNA271036.
An updated version called with pileupMT() will be added presently.
Usage
1
Format
An MVRangesList object, which subclasses VRangesList
Source
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA271036/
Examples
1
2
3
4
library(MTseeker)
data(RONKSvariants)
show(RONKSvariants)
endoapply(RONKSvariants, subset, PASS == TRUE)
trichelab/MTseekerData documentation built on Nov. 19, 2019, 6:09 p.m.
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Description Usage Format Source Examples
Description
RONKS == "Renal Oncocytoma, Normal Kidney Sample" matched by patient This object was produced by applying MTseeker::callMT() to PRJNA271036. An updated version called with pileupMT() will be added presently.
Usage
1 |
Format
An MVRangesList object, which subclasses VRangesList
Source
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA271036/
Examples
1 2 3 4 | library(MTseeker)
data(RONKSvariants)
show(RONKSvariants)
endoapply(RONKSvariants, subset, PASS == TRUE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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