Description Usage Arguments Details Value Author(s) Examples
Compares alleles across different individuals in a hap object.
1 | allele.match(hap, result = c("count", "percent"), graph = F)
|
hap |
An object of type gbs. |
result |
The values to be returned. Either the number of matched calls ( |
histgraph |
Logical value to graph results. |
This function ignores missing data and heterozygous calls.
A matrix with upper triangle equal to the percent identity of the individuals and lower triangle equal to the proportion of alleles that match between two individuals.
Narinder Singh, nss470@ksu.edu
Trevor Rife, trife@ksu.edu
1 2 | data(wheat)
percId = allele.match(hap$calls,graph=T)
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