Files in trvinh/PhyloProfileCorona
PhyloProfileCorona
.Rbuildignore
.gitignore
.travis.yml
CONTRIBUTING.md
DESCRIPTION
LICENSE
NAMESPACE
R/createProfilePlot.R
R/identifyCoreGene.R
R/parsePhyloProfile.R
R/runPhyloprofile.R
README.md
_config.yml
inst/CITATION
inst/PhyloProfile/R/analyzeDistribution.R
inst/PhyloProfile/R/createArchitecturePlot.R
inst/PhyloProfile/R/createDetailedPlot.R
inst/PhyloProfile/R/createProfilePlot.R
inst/PhyloProfile/R/downloadFilteredCustomized.R
inst/PhyloProfile/R/downloadFilteredMain.R
inst/PhyloProfile/R/functions.R
inst/PhyloProfile/R/identifyCoreGene.R
inst/PhyloProfile/R/resetTaxData.R
inst/PhyloProfile/data/idList.txt
inst/PhyloProfile/data/newTaxa.txt
inst/PhyloProfile/data/rankList.txt
inst/PhyloProfile/data/taxonNamesReduced.txt
inst/PhyloProfile/data/taxonomyMatrix.txt
inst/PhyloProfile/global.R
inst/PhyloProfile/help.html
inst/PhyloProfile/server.R
inst/PhyloProfile/ui.R
inst/extdata/coronavirus/coronavirus.domains
inst/extdata/coronavirus/coronavirus.fasta
inst/extdata/coronavirus/coronavirus.nwk
inst/extdata/coronavirus/coronavirus.phyloprofile
inst/extdata/data/idList.txt
inst/extdata/data/preProcessedTaxonomy.txt
inst/extdata/data/rankList.txt
inst/extdata/domainFiles/101621at6656.domains
inst/extdata/fastaFiles/RAT@10116@1.fa
inst/extdata/fastaFiles/concatenatedFile.fa
inst/extdata/test.main.fasta
inst/extdata/test.main.long
inst/extdata/test.main.wide
inst/extdata/test.main.xml
man/getCoreGeneCr.Rd
man/getInputTaxaNameCr.Rd
man/getNameListCr.Rd
man/getSelectedTaxonNamesCr.Rd
man/getTaxonomyMatrixCr.Rd
man/highlightProfilePlotCr.Rd
man/runPhyloProfileCorona.Rd
man/sortInputTaxaCr.Rd
