Files in trvinh/PhyloProfileCorona

PhyloProfileCorona

.Rbuildignore

.gitignore

.travis.yml

CONTRIBUTING.md

DESCRIPTION

LICENSE

NAMESPACE

R/createProfilePlot.R R/identifyCoreGene.R R/parsePhyloProfile.R R/runPhyloprofile.R README.md

_config.yml

inst/CITATION

inst/PhyloProfile/R/analyzeDistribution.R inst/PhyloProfile/R/createArchitecturePlot.R inst/PhyloProfile/R/createDetailedPlot.R inst/PhyloProfile/R/createProfilePlot.R inst/PhyloProfile/R/downloadFilteredCustomized.R inst/PhyloProfile/R/downloadFilteredMain.R inst/PhyloProfile/R/functions.R inst/PhyloProfile/R/identifyCoreGene.R inst/PhyloProfile/R/resetTaxData.R

inst/PhyloProfile/data/idList.txt

inst/PhyloProfile/data/newTaxa.txt

inst/PhyloProfile/data/rankList.txt

inst/PhyloProfile/data/taxonNamesReduced.txt

inst/PhyloProfile/data/taxonomyMatrix.txt

inst/PhyloProfile/global.R

inst/PhyloProfile/help.html

inst/PhyloProfile/server.R inst/PhyloProfile/ui.R

inst/extdata/coronavirus/coronavirus.domains

inst/extdata/coronavirus/coronavirus.fasta

inst/extdata/coronavirus/coronavirus.nwk

inst/extdata/coronavirus/coronavirus.phyloprofile

inst/extdata/data/idList.txt

inst/extdata/data/preProcessedTaxonomy.txt

inst/extdata/data/rankList.txt

inst/extdata/domainFiles/101621at6656.domains

inst/extdata/fastaFiles/RAT@[e-mail]

inst/extdata/fastaFiles/concatenatedFile.fa

inst/extdata/test.main.fasta

inst/extdata/test.main.long

inst/extdata/test.main.wide

inst/extdata/test.main.xml

man/getCoreGeneCr.Rd man/getInputTaxaNameCr.Rd man/getNameListCr.Rd man/getSelectedTaxonNamesCr.Rd man/getTaxonomyMatrixCr.Rd man/highlightProfilePlotCr.Rd man/runPhyloProfileCorona.Rd man/sortInputTaxaCr.Rd

trvinh/PhyloProfileCorona documentation built on Feb. 10, 2021, 9:42 a.m.