getInputTaxaNameCr: Get NCBI taxon names for a selected list of taxa

Description Usage Arguments Value Author(s)

View source: R/parsePhyloProfile.R

Description

Get NCBI taxon names from "PhyloProfile/data/taxonNamesReduced.txt" for a list of input taxa

Usage

1
getInputTaxaNameCr(rankName, taxonIDs = NULL)

Arguments

rankName

taxonomy rank (e.g. "species","phylum",...)

taxonIDs

list of taxon IDs (e.g. ncbi1234). Default = NULL

Value

Data frame contains a list of full names, taxonomy ranks and parent IDs for the input taxa.

Author(s)

Vinh Tran tran@bio.uni-frankfurt.de


trvinh/PhyloProfileRibi documentation built on Dec. 23, 2021, 12:57 p.m.