getTaxonomyMatrixCr: Get taxonomy matrix

Description Usage Arguments Value Author(s)

View source: R/parsePhyloProfile.R

Description

Get the (full or subset) taxonomy matrix from "data/taxonomyMatrix.txt" based on an input taxon list

Usage

1
getTaxonomyMatrixCr(subsetTaxaCheck = FALSE, taxonIDs = NULL)

Arguments

subsetTaxaCheck

TRUE/FALSE subset taxonomy matrix based on input taxon IDs. Default = FALSE.

taxonIDs

list of input taxon IDs (e.g. ncbi1234). Default = NULL.

Value

Data frame contains the (subset of) taxonomy matrix for list of input taxa.

Author(s)

Vinh Tran tran@bio.uni-frankfurt.de


trvinh/PhyloProfileRibi documentation built on Dec. 23, 2021, 12:57 p.m.