getRepresentative: Get representative from a list of taxa based on a selected...
In trvinh/taxFun: taxFun
getRepresentative R Documentation
Get representative from a list of taxa based on a selected taxonomy rank
Description
Get representative from a list of taxa based on a selected taxonomy rank
Usage
getRepresentative(taxonList = NULL, rank = NULL)
Arguments
taxonList
List of taxa
rank
Taxonomy rank used for sub-sampling. Each super taxon of this
rank will have one representative.
Value
A dataframe contains sub-selected taxa including their IDs, names, as
well as IDs and names of the supertaxa from the selected rank.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
Examples
taxonList <- c(
214684, 246409, 3055, 336722, 3702, 400682, 441375, 45351, 4558, 559292,
6239, 7227, "Homo sapiens"
)
getRepresentative(taxonList, rank = "phylum")
trvinh/taxFun documentation built on July 3, 2023, 8:55 p.m.
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| getRepresentative | R Documentation |
Get representative from a list of taxa based on a selected taxonomy rank
Description
Get representative from a list of taxa based on a selected taxonomy rank
Usage
getRepresentative(taxonList = NULL, rank = NULL)
Arguments
taxonList |
List of taxa |
rank |
Taxonomy rank used for sub-sampling. Each super taxon of this rank will have one representative. |
Value
A dataframe contains sub-selected taxa including their IDs, names, as well as IDs and names of the supertaxa from the selected rank.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
Examples
taxonList <- c(
214684, 246409, 3055, 336722, 3702, 400682, 441375, 45351, 4558, 559292,
6239, 7227, "Homo sapiens"
)
getRepresentative(taxonList, rank = "phylum")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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