measure: Loop through a gene set or sets and compute its measure

In ttriche/dendRix: Port of DENDRIX (Vandin, Upfal, & Raphael, Genome Res, 2011) to R

Description

This is an integral function for the Dendrix sampler and as such should be C++

Usage

measure(genes_collection1, genes_collection2, sample_mutatedGenes, c)

Arguments

genes_collection1	A set of aberrations.
genes_collection2	Another set of aberrations.
sample_mutatedGenes	Per-sample mutation tabulation.
c	A constant (default 0.5)

Value

The measure of the set.

Author(s)

Tim Triche, Jr.

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

ttriche/dendRix documentation built on June 1, 2019, 2:50 a.m.