GetChroms: Get a list of the chromosomes of a genome
In uashogeschoolutrecht/scPlot: Plot
Description
Usage
Arguments
Value
Examples
Description
Get a list of the chromosomes of a genome
Usage
1
Arguments
g_url
Url to the ".gtf" file of the researched genome on the ncbi website.
dl_folder
Path to the folder to download the files in.
gen_name
Name to store the downloaded files, and title name of the plot.
Value
List of chromosomes
Examples
1
2
3
GetChroms(g_url = "ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/277/835/GCF_002277835.1_ASM227783v1/GCF_002277835.1_ASM227783v1_genomic.gtf.gz",
dl_folder = "C:/Users/Downloads",
gen_name = Flavobacterium_ir1)
uashogeschoolutrecht/scPlot documentation built on Nov. 23, 2019, 11:27 a.m.
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Description Usage Arguments Value Examples
Description
Get a list of the chromosomes of a genome
Usage
1 |
Arguments
g_url |
Url to the ".gtf" file of the researched genome on the ncbi website. |
dl_folder |
Path to the folder to download the files in. |
gen_name |
Name to store the downloaded files, and title name of the plot. |
Value
List of chromosomes
Examples
1 2 3 | GetChroms(g_url = "ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/277/835/GCF_002277835.1_ASM227783v1/GCF_002277835.1_ASM227783v1_genomic.gtf.gz",
dl_folder = "C:/Users/Downloads",
gen_name = Flavobacterium_ir1)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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